Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSGCAWGAEPPRFLEAFGRLWQVQSRLGSGSSASVYRVRCCGNPGSPPGALKQFLPPGTTGAAASAAEYGFRKERAALEQLQGHRNIVTLYGVFTIHFSPNVPSRCLLLELLDVSVSELLLYSSHQGCSMWMIQHCARDVLEALAFLHHEGYVHADLKPRNILWSAENECFKLIDFGLSFKEGNQDVKY---IQTDGYRAPEAELQNCLAQAGLQSDTECTSAVDLWSLGIILLEM------FSG-MKLKHTVRSQEWKANSSAIIDHIFASKAVVNAAIPAYHLRD--------------LIKSMLHDDPSRRIPAEMALCSPFFSIPFAPHIEDLVMLPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRGYLYQTLL |
| 3QX2 Chain:A ((9-306)) | ---------------MENFQKV----EKIGEGTYGVVYKARNKLT-GEVVALKKIR----TEGVPSTAI-----REISLLKELN-HPNIVKLLDV--IHTENKL---YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI-LLGC---------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF--------QD-VTKPVPHLRL---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QX2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133569 for 2088 contacts (-64.0/contact) +
2D Compatibility (PS) -29028 + (NN) -10213 + (LL) 8308
1D Compatibility (HY) -21200 + (ID) 4750
Total energy: -190452.0 ( -91.21 by residue)
QMean score : 0.285
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