Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------VVVARAALSCSTVYNTLLPCLPYVQSGGA-----VPAACCGGIRSVVAAA-----------------RTTADRRAACTCLKNVAAGAAG-GP-----------YISRAAGLPGRCGVSVPFKISPNVNCNAVN----------------------- |
| 1HO1 Chain:A ((2-243)) | AELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDAD----EEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI--------IGRAVMTGLKDAVAEMKRLMLEARG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -42047 for 463 contacts (-90.8/contact) +
2D Compatibility (PS) -9427 + (NN) 2084 + (LL) -248
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -52038.0 ( -112.39 by residue)
QMean score : 0.286
|
|
|