Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASSTADRRTACNCL--KNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS
1L6H Chain:A ((6-66))
-------GQLTVCTGAIAGGARPTAACCSSLRA-----------QQGCFCQFAKDPRYG-RYVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20179 for 389 contacts (-51.9/contact) +
2D Compatibility (PS) -6360 + (NN) -3890 + (LL) 2268
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -32061.0 ( -82.42 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: