Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVNSAVGPCLTYARGGGAGPSAACCNGVRSLKSAARTTADRRTACNCL--KNA-ARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVR
1L6H Chain:A ((6-66))
-------GQLTVCTGAIAGGA-RPTAACCSSLRA-----------QQGCFCQFAKDPRYGR--YVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18636 for 381 contacts (-48.9/contact) +
2D Compatibility (PS) -6342 + (NN) -4155 + (LL) 2640
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -30243.0 ( -79.38 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: