Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACQ--ASQLAVCASAILSGAK-PSGECCGNLR-----------AQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP---------HC---
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22734 for 368 contacts (-61.8/contact) +
2D Compatibility (PS) -6300 + (NN) 2550 + (LL) 484
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -30150.0 ( -81.93 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: