Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASRTAPAAATKCDPL--ALRPCAAAILWGEA-PSTACCAGLRA-----------QKRCLCRYAKNPDLRKY--INSQNSRKVAAACSVPAPRC
1AFH Chain:A ((2-80))
---------ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25440 for 432 contacts (-58.9/contact) +
2D Compatibility (PS) -6570 + (NN) -1646 + (LL) 1228
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -37378.0 ( -86.52 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: