Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KTLILGEEVKATCDFT--KFQVCKPEIITGSP-PSEECCEKLKE-----------QQSCLCAYLISPSISQY--IG--NAKRVIRACGIPFPNCS
1AFH Chain:A ((2-80))
----------ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29774 for 415 contacts (-71.7/contact) +
2D Compatibility (PS) -6481 + (NN) -5086 + (LL) 1352
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -43889.0 ( -105.76 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: