Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVRVEEEEKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLK----IPSFTQYVSSGK----AQKV----LTACAI---PIPKC
1IMO Chain:A ((835-922))
-----GSADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACIRKRRLVAPC
General information:
TITO was launched using:
RESULT:
Template:
1IMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28395 for 540 contacts (-52.6/contact) +
2D Compatibility (PS) -7286 + (NN) -1223 + (LL) 868
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -40086.0 ( -74.23 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_1IMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IMO-query.scw
PDB file :
Tito_Scwrl_1IMO.pdb
: