Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EETQSCVPM--ELMPCLPAMTKREQPTKDCCENLIK-----------QKTCLCDYIKNPLYSMF--TISLVARKVLETCNVPYTSC
1T12 Chain:A ((2-78))
---ITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44617 for 390 contacts (-114.4/contact) +
2D Compatibility (PS) -6153 + (NN) -1508 + (LL) 516
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -55362.0 ( -141.95 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: