Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQLSQLAPCARYSVPPLPGQALPAPGPECCSALGSV--SRDCACGAIDI---------------------INSLPAKCGLP-RVSCQ
3OB4 Chain:A ((429-488))
----------------------------------ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC-
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16445 for 190 contacts (-86.6/contact) +
2D Compatibility (PS) -3722 + (NN) -126 + (LL) 884
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -24009.0 ( -126.36 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: