Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICNLSDAGLQACKPAAAVRNPADTPSSECCDALAAADL----------PCLCRYKGSAGARVWVRFYGIDLNRAMTLPGKCGLTLPAHC
1BWO Chain:A ((3-79))
-CGHVDSLVRPCLSYVQGG-P--GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR----GI--HNLNEDNARSIPPKCGVNLPY--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13863 for 430 contacts (-32.2/contact) +
2D Compatibility (PS) -7015 + (NN) -3116 + (LL) 788
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -26106.0 ( -60.71 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: