Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADF----------ACLCGYKNSPWLGSF-GVDPELASALPKQCGLANAPTC
1T12 Chain:A ((3-78))
--TCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTC-LKSA--AGAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16084 for 436 contacts (-36.9/contact) +
2D Compatibility (PS) -6686 + (NN) -3119 + (LL) -176
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -30565.0 ( -70.10 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: