Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSICDMDINDMQKCRPAITGNNPPPPVNDCCVVVRKANF----------ECLCRFKFYLPILRIDPSKVVALVAKCGVTTVPRSCQV
1BWO Chain:A ((3-78))
---CGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLP------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26418 for 427 contacts (-61.9/contact) +
2D Compatibility (PS) -6532 + (NN) -2953 + (LL) 464
1D Compatibility (HY) 0 + (ID) 750
Total energy: -36189.0 ( -84.75 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: