Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPVCNIDTNDLAKCRPAVTGNNPPPPGPDCCAVARVAN----------LQCLCPYKPYLPTV-GIDPSRVRPLLANCGVNSPSCF
2ALG Chain:A ((3-79))
--TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLSASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27690 for 424 contacts (-65.3/contact) +
2D Compatibility (PS) -6765 + (NN) -2304 + (LL) -136
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -40445.0 ( -95.39 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: