Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAPSSAQGTTTPADASGAVPSCASKLVTCAGYLNT-TD-----T-------PPESCCDPLKEAATTQAACMCAILMNKA--ALQAFG--VAPEQGVLLAKRCGVTNDASTCAK
1S6D Chain:A ((19-102))
-----------------------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMS--QPCQ-
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31780 for 448 contacts (-70.9/contact) +
2D Compatibility (PS) -7020 + (NN) -1885 + (LL) 960
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -44875.0 ( -100.17 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: