Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HPCGRTFLSALIQLVPCRPSVAPFSTLPPNGLCCAAIKTLGQ----------PCLCVLAKGPPIV-GVDRTLALHLPGKCSANFLPCN
1T12 Chain:A ((3-78))
-----TCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTC-LKSAAGAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43160 for 436 contacts (-99.0/contact) +
2D Compatibility (PS) -6637 + (NN) -2239 + (LL) 4
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -54982.0 ( -126.11 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: