Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------KMVTY-PNGDRHCVMAQGQVISACLQQANGLPHADCCYAINDVNRYVETIYGRLALCKCFQEILKDSRFT-----KLIGMPEKCAIP----NAVPFDPKTDCDRFVEHIWLKMF
2HFT Chain:? ((1-106))
SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQ---IS-----TKSGDWKSKCFYTTDTE------------CDLTDEIVKDVKQTYLARVFSYPAGNVESTEPLYENSPEFTPYLET------------
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16545 for 391 contacts (-42.3/contact) +
2D Compatibility (PS) -7693 + (NN) -3581 + (LL) 3452
1D Compatibility (HY) -400 + (ID) 750
Total energy: -25517.0 ( -65.26 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: