Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------NRA-LTCGTVNS--NVAPCIGYITQGGTLPG---ACCTGVSKLNSMAR-----------TTPDRQQACRCLETAARAL----GPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32985 for 486 contacts (-67.9/contact) +
2D Compatibility (PS) -9199 + (NN) 1268 + (LL) -460
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -45226.0 ( -93.06 by residue)
QMean score : 0.502
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