Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNSVK
2ALG Chain:A ((1-92))
MITCGQVSSSLAPCIPYVRGGG--AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55005 for 636 contacts (-86.5/contact) +
2D Compatibility (PS) -9466 + (NN) -606 + (LL) -28
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -77555.0 ( -121.94 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: