Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVTSSLASCIPFLTKGGAVPASCCSGVRSLNAAAKTTPDRQVCNCLKSAAGAIPGFNANNAGI-LPGKCGVSIHYNISTSTNCATIKF
1HYP Chain:? ((6-80))
-PSC----PDLSICLNILGGSLGTVDDCCALIGGL-------GDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYP----SNATCPRT--
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48156 for 484 contacts (-99.5/contact) +
2D Compatibility (PS) -7432 + (NN) 754 + (LL) 1240
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -59694.0 ( -123.33 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: