Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCGVVASNLAPCIGYLRN---GGK----VPDPCCKGVGALNNAAKTTKDRRDACNCIKTTATQIG-------G----VNAANAAALPGFCRVNIPYKISTSTNCASIK
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42122 for 407 contacts (-103.5/contact) +
2D Compatibility (PS) -6435 + (NN) 749 + (LL) 1616
1D Compatibility (HY) -6800 + (ID) 750
Total energy: -53742.0 ( -132.04 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: