Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGQVTSGLAPCLPYLQGSG-PLGGCCGGVKGLLGAAKTPEDRKTACTCL--KSA-ANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSKVQ
1L6H Chain:A ((6-66))
-------GQLTVCTGAIAGGARPTAACCSSLRA-----------QQGCFCQFAKDPRYGR--YVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20642 for 375 contacts (-55.0/contact) +
2D Compatibility (PS) -5935 + (NN) -3031 + (LL) 1780
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -30878.0 ( -82.34 by residue)
QMean score : 0.133
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: