Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADAGAGAACEPA--QLAVCASAILGGTK-PSGECCGNLRA-----------QQGCLCQYVKDPNYGHY--VSSPHARDTLNLCGIPVPHC
1AFH Chain:A ((2-80))
------ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33336 for 432 contacts (-77.2/contact) +
2D Compatibility (PS) -6213 + (NN) 1540 + (LL) 416
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -41643.0 ( -96.40 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: