Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCS--VTELMPCSSAFT-SSAAPTAQCCTKLK-----------EQSPCLCGYLKNPTLKQYITNPNAKKVTSTCGVPIP---------NC---
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21295 for 389 contacts (-54.7/contact) +
2D Compatibility (PS) -6285 + (NN) -697 + (LL) 248
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -32529.0 ( -83.62 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: