Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GGVVEICNVSKDDLMPCKPAVTQPPAQPVQACCSVLSTANL----------TCFCEFGNNYPSLLRMF-GIDPDLAKALPGECKLNSPPGC
1T12 Chain:A ((3-78))
-----TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC-LKSA----AGAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34668 for 436 contacts (-79.5/contact) +
2D Compatibility (PS) -6340 + (NN) -2286 + (LL) 356
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -46588.0 ( -106.85 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: