Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DKCGNQIQGLLNKCSPILLG-KSPSAACCGLIRSAD----------MGCVCPKVTPQIAK--QINVSKVVSVVKSCGRNVP----HRTRCGSIVTP
2ALG Chain:A ((3-91))
-TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36618 for 446 contacts (-82.1/contact) +
2D Compatibility (PS) -7242 + (NN) 18 + (LL) 128
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -47514.0 ( -106.53 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: