Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCGGSFVDIEAQCSQFVHKTGPKTPPSLGCCQVVKTLN----------VNCVCRFVTPQVEAM--ISMEKVVYVARTCGVTVR----AGTQCGKFKFLAMPIFQG
2ALG Chain:A ((3-91))
TCGQVSSSL-APCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV----------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46796 for 465 contacts (-100.6/contact) +
2D Compatibility (PS) -6925 + (NN) 2427 + (LL) 1180
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -54564.0 ( -117.34 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: