Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSAAQCKEERRLGLNACKPVIYG-KLPSPACCERVRVSH----------VECVCPVITPKLAA--LIDLDRAIRLIEGCGRRVP----RHFKCGSITTP
2ALG Chain:A ((3-91))
-----TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33319 for 446 contacts (-74.7/contact) +
2D Compatibility (PS) -7517 + (NN) -2022 + (LL) 772
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -44586.0 ( -99.97 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: