Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
INCDNDLIGLASKCQKYVVKQGSSAKPSPECCKVVKNVN----------VPCVCSHVTKQIED--LISMKKVFDVAKSCGKKVT----PGTKCGSYTVPN
2ALG Chain:A ((2-91))
ITCGQVSSS-LAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19589 for 469 contacts (-41.8/contact) +
2D Compatibility (PS) -7374 + (NN) -347 + (LL) 304
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -30706.0 ( -65.47 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: