Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGLSPSQCKQEQTLGVNACRDILLG-KAPSPACCGRVRVSH----------VECICPAITPKLAS--LINVKQAIKLLQDCGRKVP----RHFKCGSLNFP
2ALG Chain:A ((3-91))
------TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27957 for 446 contacts (-62.7/contact) +
2D Compatibility (PS) -7373 + (NN) -306 + (LL) 60
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -38626.0 ( -86.61 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: