Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVL------PGAVNP-------APNSNCCIALQATNKDCICNALRAA----------------------TTFTTTCNLPS-LDCGITI
1SM7 Chain:A ((13-106))
-------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCPF--
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46967 for 357 contacts (-131.6/contact) +
2D Compatibility (PS) -5949 + (NN) -1464 + (LL) 748
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -58682.0 ( -164.38 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: