Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQTCAGQLRGLAPCLRYSV----PPLPGQVPPA--PGPECCSALGAVSRDCACGTFS--------------------------------IINSL--PAKCGLPPVSCQ
1BEA Chain:A ((14-109))
-------HNPLPSCRWYVTSRTCGIGP--RLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33182 for 332 contacts (-99.9/contact) +
2D Compatibility (PS) -5619 + (NN) -2604 + (LL) 536
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -45219.0 ( -136.20 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: