Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVV------PGATNT-------NPNAECCSALQSVEHDCLCNTLRI----------------------AARLPSQCNLAP-VNCGNW
1SM7 Chain:A ((13-105))
-------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCP--
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46333 for 347 contacts (-133.5/contact) +
2D Compatibility (PS) -5937 + (NN) -1426 + (LL) 432
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -58114.0 ( -167.48 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: