Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATAELLSPCASAVGN---NPQDP---TPECCAVLQTADVDCICALVE-----------------------STIKLPSECGLDT-PQCPSD
1HSS Chain:A ((15-108))
---------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDAS--
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35827 for 312 contacts (-114.8/contact) +
2D Compatibility (PS) -5664 + (NN) -4540 + (LL) 596
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -47985.0 ( -153.80 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: