Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGACGKTSPDQEAMKLAPCAMAAQDAK----A-A----VSDSCCTQVRSIGQNPSCLCAVMLSDMA---K------A---SG--------IKAEIAITI--PKRCNIANRPVGYKCGDYTLP
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38889 for 410 contacts (-94.9/contact) +
2D Compatibility (PS) -6466 + (NN) -1317 + (LL) 420
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -52102.0 ( -127.08 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: