Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TWEVKMAGAELSDAQCKEERNLGINACKPVVYGKLPSPECCQRVRVT-HLE---CVCPVISPQLAALIDINRAVR-LIEGCGRRVPRHYKCGSITTP
1HYP Chain:A ((25-79))
------------------------------------VDDCCALIGGLGDIEAIVCLCIQLRA--LGILNLNRNLQLILNSCGRSYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29876 for 253 contacts (-118.1/contact) +
2D Compatibility (PS) -4976 + (NN) 273 + (LL) 2800
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -37979.0 ( -150.11 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: