Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------YGPCGKHDIEKEAEKLAPCTKAAQYL----EAPVSKRCCTVMEKKLKNP--DCLCAI-------MFSHTARSAGVNP-EVAVTI-----------PKRCNIPVRPVGHKCGAFPLV------------------------------------------------------------------------------------------------------- |
| 1GUY Chain:A ((1-306)) | MRKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGALIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATLDTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14894 for 548 contacts (-27.2/contact) +
2D Compatibility (PS) -9843 + (NN) -5787 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 650
Total energy: -29974.0 ( -54.70 by residue)
QMean score : 0.416
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