Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASTPSSNCESAQM---KLVPCLTYVTGS------DS---------KPPTECCSGLKDLNTNNPTCLCQLITQLNSTS-----SGSSNV--NVAKVLALPRDCSVTLITSDCPGKDLL
1SM7 Chain:A ((3-107))
-----QKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-IGTCPFI---
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34882 for 567 contacts (-61.5/contact) +
2D Compatibility (PS) -8104 + (NN) -2638 + (LL) 372
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -48802.0 ( -86.07 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: