Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAKVMPSRQCCSNIAGMGKGLP-----GAKCLCSLLSHPLARSQ-GVAPRIALGIPQKCRIAVP----RGFVCQGIRVPGS
1BWO Chain:A ((5-88))
--HVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR---GIHNLNEDNARSIPPKCGVNLPYTISLNIDCS-------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24605 for 477 contacts (-51.6/contact) +
2D Compatibility (PS) -7367 + (NN) -1761 + (LL) 440
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -35693.0 ( -74.83 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: