Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTGAEPTDQCCETLAGVMSMDDGLACLCDALTSDAAS---SLGI----------RTSDAVQLPSKCQAKTGLTYTHG---YNCKGATVP
1HSS Chain:A ((37-116))
-----------------------VLRDCCQQLAHI-----SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIV-VDASGDGAYVCK-----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23443 for 299 contacts (-78.4/contact) +
2D Compatibility (PS) -5759 + (NN) -85 + (LL) 2036
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -30451.0 ( -101.84 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: