Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLQQVAGCLDAVTKGATPTGSCCTQLGQVDAPCFCNLLAN---------GKYS-----DAYVNNALHVPARCGSNSAAYAKFKGRNCAGYVVP
2LVF Chain:A ((47-101))
---------------------SECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMM-RLAENIPSRCNLS------------------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16751 for 185 contacts (-90.5/contact) +
2D Compatibility (PS) -4221 + (NN) -498 + (LL) 2456
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -22014.0 ( -118.99 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: