Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQSCSDWTQLLDCQNAASDPSATPSGECCNRIRQYQNAPDCLCTMLLAARNAAQSTGLPFNLQAALSIPAKCHVQVPSGYSCAGIPIPSS
1N89 Chain:A ((5-65))
--------SQLAVCASAILSG-AKPSGECCGNLRAQ--Q-GCFCQYAKDPT-----YGQYIRSPHARDTLTSCGLAVP-------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27309 for 385 contacts (-70.9/contact) +
2D Compatibility (PS) -6210 + (NN) -1874 + (LL) 576
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -37767.0 ( -98.10 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: