Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNSFMSVLSCQSATMSESAMPSPACCAALQKFHDADCLCQVLLSARSAAATANVPFNLKAALEIPMKCALRTVSAPPGYSCGGMVVPRSPPPTST
1N89 Chain:A ((5-63))
-----------SQLAVCASAILSG-AKPSGECCGNLRAQ-Q-GCFCQYAKD---P--TYGQYIRSPHARDTLTSCGLA------------------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30197 for 362 contacts (-83.4/contact) +
2D Compatibility (PS) -5985 + (NN) -666 + (LL) 276
1D Compatibility (HY) -800 + (ID) 850
Total energy: -38222.0 ( -105.59 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: