Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GCGPKLGVLLPCLPFLQGQGS------------NPTQPCCNGLETVVKSNPACLCALVNSQ----L-GNR--INITLALSLPSLCNLAGVTIDLCN
1S6D Chain:A ((20-102))
-------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--S-QPCQ
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55015 for 423 contacts (-130.1/contact) +
2D Compatibility (PS) -6476 + (NN) -488 + (LL) 92
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -67887.0 ( -160.49 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: