Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQDLKICVPYVQKKGPKIPPSQACCDAIKGVD----------ILCVCHHLPPDIGE--LISIEKVVFVLQVCREPLA----PGTKCGT
2ALG Chain:A ((3-89))
TCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCA-
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36859 for 441 contacts (-83.6/contact) +
2D Compatibility (PS) -6943 + (NN) 792 + (LL) 268
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -45642.0 ( -103.50 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: