Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AMSAAECKEERRLGIKVCTPVVYG-NDPTPACCERVRVTH----------VECVCPMITPKLAP--LIDVDRLVRLIKGCGRKVP----RHFKCGGITTP
2ALG Chain:A ((3-91))
-----TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28857 for 446 contacts (-64.7/contact) +
2D Compatibility (PS) -7605 + (NN) -3974 + (LL) 848
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -41688.0 ( -93.47 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: