Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSAAKCKEERRLGINACKAVVYG-KSPTPACCHRMRVTH----------LGCVCSVITPKLAA--LVDVNRMIELVKGCGRKLP----RHYKCGSITFP
2ALG Chain:A ((3-91))
-----TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30093 for 446 contacts (-67.5/contact) +
2D Compatibility (PS) -7423 + (NN) -1268 + (LL) 1008
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -40326.0 ( -90.42 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: