Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPTECKEERKVAGNACRPVLYW-RSPSADCCQRVRVSH----------VECVCPYVSTKTAAIIGGLGVPYVVKKIEGCGRTVP----RKFKCGSITTP
2ALG Chain:A ((3-91))
-----TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22493 for 464 contacts (-48.5/contact) +
2D Compatibility (PS) -7489 + (NN) -1119 + (LL) -96
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -33097.0 ( -71.33 by residue)
QMean score : 0.125
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: