Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------GPYCRDVV--ETILPCIEYITTPGASTLPA--------------------PCCNGMKSLNGEPQYVCRCLKETFFVL---PGLN-------LAALAALPKNCGVNLPYQITPDMNCDKVN
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVR-CMRQTRTN------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55478 for 593 contacts (-93.6/contact) +
2D Compatibility (PS) -8313 + (NN) -7725 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -73516.0 ( -123.97 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: