Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SQVNAPCTWTEISEEYDYCGDSLTRGVPWVSPLKVCCDTIKLNK----------MKCICQVVTKTFSQN--FDFYKLSKLSHACGDLLV----PGSYCGGNYH
2ALG Chain:A ((3-89))
------TCGQVSSS-LAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCA----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16098 for 448 contacts (-35.9/contact) +
2D Compatibility (PS) -7362 + (NN) -2643 + (LL) 716
1D Compatibility (HY) 1200 + (ID) 600
Total energy: -24787.0 ( -55.33 by residue)
QMean score : 0.125
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: